Scoop HQ

Having learned about - and probably had some of their tuxemon become infected with - the Spyder Bite disease in the Wayfarers' Inn, the protagonist follows rumours that the disease was created by Scoop for some reason. They break into the Scoop HQ building via a side door. Someone tips them off that due to the system of conveyor belts inside, the protagonist won't be able to get back out unless they fight through a fair amount of the building - so to make sure they have the tuxemon and items that they need!

In the first room, the protagonist observes the cramped, dirty conditions that the farm tuxemon are kept in before being harvested, but the Scoop employees are clear that while the disease began here, it wasn't deliberately spread by them. Enforcers came by and bossily interfered with the quarantine, and presumably the disease infected their tuxemon. When they left, the disease went with them.

The protagonist can then fight their way to the quarantine room itself, where the original tuxemon to catch the disease were kept. When they get there, however, the protagonist finds that someone stole the tuxemon's restraints. Unrestrained, they broke through the quarantine room into a storeroom beyond.

When the protagonist gets into the storeroom, they will have to fight the escaped tuxemon. This is the only chance to catch some rare tuxemon. Also in the store room are the purple-uniformed people discussed earlier - they stole the restraints, but then got trapped by the escaped tuxemon. They let slip that although Scoop uses the restraints on livestock, they're "strong enough to trap a dragon!" When the protagonist beats the escaped tuxemon, that clears a path for the purple-uniformed villains to escape with the restraints.